Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKAIEFKEVEKSFQDGDQVVKALKETTMSIDKGEFVAIIGPSGSGKSTFLTLAGGLQTPSSGSVFINDQEFSNQKESERVKLRFKEIGFILQ---------ASNLVPFLTVKKQLLLVDKIKHEHRQKEAKELFEQL--GVDKLINKYPEELSGGERQRVAIARALYNDPSIILADEPTASLDSEKAREVVDILAKESKDKNKATIMVTHDTRLIDKCDRIFMMEDGVLKEKE
5L22 Chain:B ((348-546))---------------------VLRNINMRILPGEFVAIIGPSGSGKSSLVRTILGIWLPVHGTVEIDGADL---KQWDRDYFG-KFVGYLPQDIELFEGTVAENIARFGELDSE-----KIIEAAKLSGAHDVIIKLPDGYDTYIGPGGITLSGGQRQRIALARALYGNPRIVILDEPDSNLDEQGEQALYNALI-ELKKRKVTTIIVSHRIRLLNLVDKIAIMQDGTLK---


General information:
TITO was launched using:
RESULT:

Template: 5L22.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 885 5720 6.46 30.42
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain B : 0.76

3D Compatibility (PKB) : 6.46
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.533

(partial model without unconserved sides chains):
PDB file : Tito_5L22.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5L22-query.scw
PDB file : Tito_Scwrl_5L22.pdb: