Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLENDIKKVLVSHDEITEAAKKLGAQLTKDY--AGKNPILVGILKGSIPFMAELVKHIDTHIEMDFMMVSSYHGGTASSGVINIKQDVTQDIKGRHVLFVEDIIDTGQTLKNLRDMFKEREAASVKIATLLDKPEGRVVEIEADYTCFTIPNEFVVGYGLDYKENYRNLPYIGVLKEEVYSN
4RHT Chain:C ((23-195))------KSVLLTAEQIQARIAELGEQIGNDYRTTGQDLLLITVLKGAVLFVTDLARAIPVPTQFEFMAVSSYG-------VVRILKDLDRDIHGRDVLIVEDVVDSGLTLSWLSRNLTSRNPRSLRVCTLLRKPDAV-ANVEIAYVGFDIPNDFVVGYGLDYDERYRDLSYIGTL-------


General information:
TITO was launched using:
RESULT:

Template: 4RHT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 752 -46007 -61.18 -289.35
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain C : 0.83

3D Compatibility (PKB) : -61.18
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.500

(partial model without unconserved sides chains):
PDB file : Tito_4RHT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RHT-query.scw
PDB file : Tito_Scwrl_4RHT.pdb: