Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEQTFFIIKPDGVKRGLVGEVLKRIEQRGFTIEKLEFRSQVSEELIDQHYQDLVGQSFYPPIREFMTSGPVLVGVISGPKVIETWRTMMGATRPEEALPGTIRGDFAKAAGENEIIQNVVHGSDSEESAKREIALWF
3NGU Chain:B ((4-133))-ERTFIAVKPDGVQRGLVGEIIARFERKGYKLVALKIL-QPTTEQAQGHYKDLCSKPFFPALVKYFSSGPIVCMVWEGKNVVKSGRVLLGATNPADSQPGTIRGDFAVDVG-----RNVCHGSDSVESAEREIAFWF


General information:
TITO was launched using:
RESULT:

Template: 3NGU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 608 -69450 -114.23 -534.23
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain B : 0.85

3D Compatibility (PKB) : -114.23
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.85
QMean score : 0.559

(partial model without unconserved sides chains):
PDB file : Tito_3NGU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NGU-query.scw
PDB file : Tito_Scwrl_3NGU.pdb: