Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFFQIQYKSSTRDGGNNVNGLFITIEGPDGAGKTSILNELYPLLKEVAKTEIIQT-REPGGIPIAEEIRAVILDPKND-RMDERTEALLYAAARRQHLVEKVLPALAKGKIVLCDRFVDSSLAYQGAGRRIGVTEIARLNEFATEGTTPDFTLYLDVDSDTGLRRIKKNRQNQIDRLDSEGLEFHQRVRHAYLKLAEENPERIHKVDARKSFEEVLQTSYHTIIEQYPQFFEN
3N2I Chain:B ((26-232))------------------NAKFIVIEGLEGAGKSTAIQVVVETLQQ-NGIDHITRTREPGGTLLAEKLRALVKEEHPGEELQDITELLLVYAARVQLVENVIKPALARGEWVVGDRHDMSSQAYQGGGRQIAPSTMQSLKQTALGDFKPDLTLYLDIDPKLGLERARGRG--ELDRIEKMDISFFERARERYLELANS-DDSVVMIDAAQSIEQVTADIRRALQDWLSQ----


General information:
TITO was launched using:
RESULT:

Template: 3N2I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 974 40989 42.08 199.95
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain B : 0.76

3D Compatibility (PKB) : 42.08
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.500

(partial model without unconserved sides chains):
PDB file : Tito_3N2I.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3N2I-query.scw
PDB file : Tito_Scwrl_3N2I.pdb: