Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEQLLPNQLEGAYDRDGKGLSVADAMPGGKQRFAIIGSEEFDWTIDQEKYIYPNHRGIDHYDRFKEDLALFAEMGFKCYRFSIAWTRIFPNGDEGTPNEAGLEFYDQLIDECLKYDIEPVITISHYEMPLHLAKEYGGWKNRKLIDFYERFAQTVLERYSSKVKYWMTFNEINSAFHFPALSQGLVKSNGARRVPKYFPSMA
3VIG Chain:A ((26-174))-------QIEGAWDENGKGPNIWDTLTHEHPDYVVDGA-----TGDIAD---------DSYHLYKEDVKILKELGAQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWDLPQAL-QDLGGWPNLVLAKYSENYARVLFKNFGDRVKLWLTFNE-------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3VIG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 634 -46787 -73.80 -314.00
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -73.80
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.517

(partial model without unconserved sides chains):
PDB file : Tito_3VIG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VIG-query.scw
PDB file : Tito_Scwrl_3VIG.pdb: