Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMERFDVERMIQMKIFVVGANGQIGRHLIKDLAPSS--HEIFAGVRDVASQTLVKKENVSYVSFDLTWSVEKMTEAFKGIDVLIFAAGSQGKNLLQVDLDGAIKTVIAAENAHVSRYLMVSAVYADEPAKWPESMTDYYITKHYADEWLKRTNLDFVILQPVTLTNDEEVTSIQ--------LTKPNEKASKTITRSTVAAVLAALVEETDISRTTLVLSEGSK-ELNTAFQEWAKEE
2JL1 Chain:A ((1-214))-----------FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYN-QPESLQKAFAGVSKLLFISGPHYD--NTLLIVQHANVVKAARDAGVKHIAYTGYAFAEES------IIPLAHVHLATEYAIRTTNIPYTFLRNALYTDFFVNEGLRASTESGAIVTNAGSGIVNSVTRNELALAAATVLTEEGHENKTYNLVSNQPWTFDELAQILS---


General information:
TITO was launched using:
RESULT:

Template: 2JL1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 985 -39988 -40.60 -196.98
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -40.60
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.478

(partial model without unconserved sides chains):
PDB file : Tito_2JL1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JL1-query.scw
PDB file : Tito_Scwrl_2JL1.pdb: