Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTFKDKVIYQIYPKSYKDSNGDGIGDLKGIKEKLPYLNDLGIDMIWLNPIYPSPQKDNGYDISDYTAIDPIFGTMEEFEQLIAEAKKYRIEIMLDMVLNHVSTEHEWFKKALA-GDQHYQDFFILREE-----------PTDWVSKFGGSAWSPFGDTGKYYLHLYDRTQADLNWRNQAVREELFK-VVRFWMEKGVKGFRFDVINVIGKDEQLKNNKE------N-DGKPEYTDKPITHTYLKELNQATFGT---DSTIITVGEMSSTTIENCILYTEPSREELSMVFNFHHLKVDYENGNKWSTPPFDFAELKRLFHTWGEKMSEGNGWNALFFNNHDQPRALNRFVAID-QYRKQGAEMLATMIHLNRGTPYIYMGEEIGMIDPDYSSISDYIDVESLNAYKLLLE----QGFTEKEAFRRIKAKSRDNSRTPMQWSDT-EQAGFTTG--KPWLKVGGKL-EEINVEKELSSEDSILSYYKKLIRLRKTYPIVAQ-G-DYHAYEAN-HPEVYGFLRQFEGQQLLVLTNFYDKDTRIAIPEGFTEANILIDNYS-DTVLHQSLELKPYQAIALLKN
3A4A Chain:A ((15-588))--WKEATFYQIYPASFKDSNDDGWGDMKGIASKLEYIKELGADAIWISPFYDSPQDDMGYDIANYEKVWPTYGTNEDCFALIEKTHKLGMKFITDLVINHCSSEHEWFKESRSSKTNPKRDWFFWRPPKGYDAEGKPIPPNNWKSYFGGSAWTFDEKTQEFYLRLFCSTQPDLNWENEDCRKAIYESAVGYWLDHGVDGFRIDVGSLYSKVVGLPDAPVVDKNSTWQSSDPYTLNGPRIHEFHQEMNQFIRNRVKDGREIMTVGEMQHASDETKRLYTSASRHELSELFNFSHTDVGTSPLFRYNLVPFELKDWKIALAELFRYINGTDCWSTIYLENHDQPRSITRFGDDSPKNRVISGKLLSVLLSALTGTLYVYQGQELGQINFKNWPVEKYEDVEIRNNYNAIKEEHGENSEEMKKFLEAIALISRDHARTPMQWSREEPNAGFSGPSAKPWFYLNDSFREGINVEDEIKDPNSVLNFWKEALKFRKAHKDITVYGYDFEFID-LDNKKLFSFTKKYNNKTLFAALNFSSDATDFKIPNDDSSFKLEFGNYPKKEVDASSRTLKPWEGRIYIS-


General information:
TITO was launched using:
RESULT:

Template: 3A4A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 3133 78841 25.16 146.54
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : 25.16
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.448

(partial model without unconserved sides chains):
PDB file : Tito_3A4A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3A4A-query.scw
PDB file : Tito_Scwrl_3A4A.pdb: