Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKVQVKLLDPRLGKEWPLPSYATAGSAGLDLRACLDEAIEIEPGQTVLVKTGMAIYIHDVNFAGLILPRSGLGHKHGIVLGNLVGLIDSDYQGELMVSVWNRGQTTFRLEPGERLAQYVLVPVV-QAEFEQVEEFEETLRGAGGFGHTGKQ
3F4F Chain:C ((40-163))-----------------VPTKGSATAAGYDIYASQD--ITIPAMGQGMVSTDISFTVP-VGTYGRIAPRSGLAVKNGIQTG--AGVVDRDYTGEVKVVLFNHSQRDFAIKKGDRVAQLILEKIVDDAQIVVVDSLEESARGAGGFG-----


General information:
TITO was launched using:
RESULT:

Template: 3F4F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 483 -64494 -133.53 -524.34
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain C : 0.77

3D Compatibility (PKB) : -133.53
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.470

(partial model without unconserved sides chains):
PDB file : Tito_3F4F.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3F4F-query.scw
PDB file : Tito_Scwrl_3F4F.pdb: