Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIILAIIQDKDSNRLSNELIDANIR-ATKLSSTGGF--------L---------KAGNSTFIVGIEDDRVEEALEIIKKTCESRKQFVSTPVTLDISMDGGVPYPVEVEVGGATVFVLPVEGFHQF
4USJ Chain:C ((18-119))FFRIEAIFRPWRLPFVIDTLSKYGIRGLTNTPVKGVGVQGGSRERYAGTEFGPSNLVDKEKLDIVVSRAQVDAVVRLVAASAYTG------------------------EIGDGKIFVHPVAEVVR-


General information:
TITO was launched using:
RESULT:

Template: 4USJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 288 -22849 -79.34 -272.01
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain C : 0.63

3D Compatibility (PKB) : -79.34
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.741

(partial model without unconserved sides chains):
PDB file : Tito_4USJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4USJ-query.scw
PDB file : Tito_Scwrl_4USJ.pdb: