Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MKKNKVILSISLAAALLFAAGCSANNTTSSSSSTESSKSTSTAESTTASSVDLNALELPQLTKDVAENEDLVEMVTNKGTIKIKLFPEYAPKAVENF--MTHAKDGY-YNGLTFHRVIKDFMIQGGD-PKGDGTGGESIWGEGFETEINNHLYNI-RGALSMARSQDPNSNGSQFFIVQNTDDMHDGLLKDDYPQAIIDAYKNGGYPSLDGHYTVFGQVIEGMDVVDAIANIETDSSDKPKEEVKIDKINILQEAKQK 2BIU Chain:X ((18-160)) ------------------------------------------------------------------------------GRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDE-NFTLKHVGPGVLSMANA-GPNTNGSQFFICT---------IKTDW---------------LDGKHVVFGHVIEGMDVVKKIESFGSKSGRTSKKIVITD-----------

General information: TITO was launched using: RESULT: Template: 2BIU.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain X - contact count / total energy / energy per contact / energy per residue : 683 30291 44.35 219.50 target 2D structure prediction score : 0.63 Monomeric hydrophicity matching model chain X : 0.71 3D Compatibility (PKB) : 44.35 2D Compatibility (Sec. Struct. Predict.) : 0.63 1D Compatibility (Hydrophobicity) : 0.71 QMean score : 0.476

(partial model without unconserved sides chains): PDB file : Tito_2BIU.pdb: (Unconserved sides chains are recalculated) : Sequence: align-2BIU-query.scw PDB file : Tito_Scwrl_2BIU.pdb: