Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIRGFELVSSFTDEN-LLPKRETAHAAGYDLKVAVRTVVAPGEIVLVPTGVKAYMQPTEVLYLYDRSSNPRKKGLVLINSVGVIDGDYYGNPGNEGHIFAQMKNITDQEVVLEVGERIVQAVFATFLIADGDAAD-----GVRT-GGFGSTGH
4OOP Chain:B ((25-166))---PSPFFKVKKLSEKAVIPTRGSPLSAGYDLSSAVDSKVPARGKALIPTDLSIAVPEGTYARIAPRSGLAWKHSIDV--GAGVIDADYR------GPVGVILFNHSDADFEVKFGDRIAQLIIEKIVTPD-VVEVDDLDETVRGDGGFGSTGV


General information:
TITO was launched using:
RESULT:

Template: 4OOP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 582 -3253 -5.59 -24.09
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain B : 0.73

3D Compatibility (PKB) : -5.59
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.448

(partial model without unconserved sides chains):
PDB file : Tito_4OOP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4OOP-query.scw
PDB file : Tito_Scwrl_4OOP.pdb: