Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQPKFNLPRHCVMSKVVLEAKDIYKHFDDGKSKVEVIKGLSLQVEAGQFVSIVGASGSGKSTLLHVLGGLDQPTKGQVFLNGQRFDNLGEAERGFQRNQYLGFVYQFHHLLPEFTALENVAMPLMLRADNQYKSVK-AQAEYLLDRVGLSHRMDHKPG--ELSGGERQRVALARALVTKPAVVLADEPTGNLDRKTAVGIFELLTDLKKELNMAMLIVTHDEQLAQAADSILHMEDGLWVNGS
5L22 Chain:B ((345-543))--------------------------------KTPVLRNINMRILPGEFVAIIGPSGSGKSSLVRTILGIWLPVHGTVEIDGA---DLKQWDRDY-FGKFVGYLPQDIELF-EGTVAENIARFGELDSEKIIEAAKLSGAHDVIIKLPDGYDTYIGPGGITLSGGQRQRIALARALYGNPRIVILDEPDSNLDEQGEQALYNALIELKKR-KVTTIIVSHRIRLLNLVDKIAIMQDG------


General information:
TITO was launched using:
RESULT:

Template: 5L22.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 939 -22696 -24.17 -115.79
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain B : 0.75

3D Compatibility (PKB) : -24.17
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.405

(partial model without unconserved sides chains):
PDB file : Tito_5L22.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5L22-query.scw
PDB file : Tito_Scwrl_5L22.pdb: