Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHRYSEKYRENGGIRVKYVEVKNEYKRYKMGETTITANDDISFSIEKGELVIILGPSGAGKSTILNILGGMDTPDEGQIIIDDTDIAQFSDKQLTAYRRTDVGFVFQFYNLVPNLTAKENVELATEVSPDALDPVEVLRQVGLAHRLNNFPSQL-----------SGGEQQRVSIARALAKNPKLLLCDEPTGALDFETGKQVLKLLQNASRQHGNTVLIITHNSALAPIADRVIHINDAKVRSVELNDHPSSIDEIVW
1MV5 Chain:A ((20-215))---------------------------------------DISFEAQPNSIIAFAGPSGGGKSTIFSLLERFYQPTAGEITIDGQPIDNISLENW----RSQIGFVSQDSAIMAG-TIRENLTYGLEGDYTDEDLWQVLDLAFARSFVENMPDQLNTEVGERGVKISGGQRQRLAIARAFLRNPKILMLDEATASLDSESESMVQKALD--SLMKGRTTLVIAHRLSTIVDADKIYFIEKGQI-----------------


General information:
TITO was launched using:
RESULT:

Template: 1MV5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 774 -19512 -25.21 -105.47
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -25.21
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.496

(partial model without unconserved sides chains):
PDB file : Tito_1MV5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1MV5-query.scw
PDB file : Tito_Scwrl_1MV5.pdb: