Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence --MLFFAFYFGRIKRRCKMKRLEQ-IIKLVSEYEKIDVNTLSEKLNVSKVTIRKDLDKLESKGLLHREHGYAVLNSGDDLNVRLSIN-YEIKRKIVQEAVKLVSDNETIMIESGSTC------------------------------------ALLAEEICKQKRNVTIVTNSFFI--------ANFVRAYDSCRIIVL--GGEFQKDSQVTVGPLLKEMIQTFHVHQAFVGTDGYD--KEMGFTGKDLM---RSEVVQYISAASD------KVIVLTDSSKFDKRGTVRRFALSQVYEVITDEKLS-----KQNIATLENAGIM-VKVVS---------------- 4QVG Chain:A ((4-344)) ELSALVPVLFGHAAFQQLNAGCQLGLFELLHERGPLSAEEVADALRLPRRSADILLLGTTALGLSTVTDG--GYRNGAPIGAAFRDGLWPVLRDIVQYQDKIAYQPAADYVESLRTGQNAGIRHFPGTTRDLYSRLAAVPGLEELFYRGMHAWSQLSNPVLLAQPDFTRVHRVLDVGGGDAVNAVALARAHPSLRVTVLDRPGALEVARKTIAEAGLEERVRTHA---ADIFTDSYPAGHDCVLFAHQLVIWSPEQNLTLLRKAYDAVEPGGRVLVFNAFTDDDRTGP-LYAALDNVYFTTLPFRHSTIHRWADCESWLREAGFTDVGRTAPPGWTPHGVVSGSRPR

General information: TITO was launched using: RESULT: Template: 4QVG.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 993 17659 17.78 68.44 target 2D structure prediction score : 0.56 Monomeric hydrophicity matching model chain A : 0.65 3D Compatibility (PKB) : 17.78 2D Compatibility (Sec. Struct. Predict.) : 0.56 1D Compatibility (Hydrophobicity) : 0.65 QMean score : 0.401

(partial model without unconserved sides chains): PDB file : Tito_4QVG.pdb: (Unconserved sides chains are recalculated) : Sequence: align-4QVG-query.scw PDB file : Tito_Scwrl_4QVG.pdb: