Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKSFAINMAPTN-HGGM----IPATQSRTSQEGNLFVRAGDGHMC---PKCKC-WSVVIKSHDHVIMDGKPVAYVGDKLSCGATIMPQQFHVVGDSGSPYSSAAPVQNSLVEDKSNEIHKVQFKLVDVDTDQPLSAMLYEIHSKESGKLLVQGYTDKNGMTAIYESEHTPESVQLITIDLSKPLDPL
4JIV Chain:D ((1-86))--GNGIVVGHLGTDHDGFPPTPVTAGSATVRYDGIPAARLGDPLAPHDKPKHPSHGRAIAAGSGTVMIDGKPAARVGDAVDCGGVLQG----------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4JIV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 326 -2113 -6.48 -27.44
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain D : 0.61

3D Compatibility (PKB) : -6.48
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.266

(partial model without unconserved sides chains):
PDB file : Tito_4JIV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4JIV-query.scw
PDB file : Tito_Scwrl_4JIV.pdb: