Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKIFSTNTCPVPNDLESVIHHKDEVPAELCGMSEQQVQKIWKSIESLYKTGNYPLITFCLRRQGKILLNRSIGYAQGNSPAGLQENALIATPDTPVCLFSASKMITAMLIHLLDEKGEINLLDPVSYYIPEYGVNGKRRATIFHLLSHRGGIPYVDGDVTPELLFDKDEILRRLYAARPVSPAGNHLAYHAVTAGYILGEIIERVTGQDLRKFVHETIEKPMDMPYFNYGLKPEYRAEVALNCATGLHPRLGTDHYLNHVLGGGLQLAVDVTNDSRFMDTICPAGNIYTSAEQAGRFFEMLLSGGSYQGKQILSEKTIFRATLPTTGVNIDRTLLIPMRYALGPMLGSN-PVGLFGPMTGQAFGHLGFSNILCWADPERDISVSLLTT--GKSVVGTHLPALANLLYQISIQCPRIPRDQRRSLFGSDSHETDLV
5GKV Chain:A ((15-371))---------------------------DITGVCPDRFAAVREVFEQNFADGGELGARFAFAIEGEVVVDLMGGFAD-------RKRQVPFGPDTLTALFSTTKAVAALLIARLVDEGRLAYDQAVADVWPEFAQAGKDAVTVEQALSHQAGLSGFPDETDPAIWFDWDATCAKLAAMAPLFPIGSASGYHPVTYGYLAGEIFRRVDGRTMGTALREDICEPLGLDLW-IGLPDSEHDRVADLMRPTAMPQFGEINPAVEAAFFKPWSSP--KGAAEWRRVEIPSANGHATAPALARLMGALAHGGTLDGRSLITPAGIKAATAERL---RGRDLVLPYEISWGAGFMRNEPNFYYGP-TAEAFGHSGWGGSCAFADPTRGVSGAYVMNKQGNALIG---------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5GKV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2153 -224855 -104.44 -638.79
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -104.44
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.527

(partial model without unconserved sides chains):
PDB file : Tito_5GKV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5GKV-query.scw
PDB file : Tito_Scwrl_5GKV.pdb: