Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMISLEFLLASAIGLLVATGIYLILRARTFPVVLGLAVLGYAVNLFLFAMGRLQVSSPAILTETTNITDPLPQALILTAIVIGFATTAFIVQLALRSRYESGSDHVDAKEDISPTYDPREDEP
3RKO Chain:G ((1-100))MIPLQHGLILAAILFVLGLTGLVIRRNLLFMLIGLEIMINASALAFVVAGSYW-------------GQTDGQVMYILAISLAAAEASIGLALLLQLHRRRQNLNIDSVSEMRG---------


General information:
TITO was launched using:
RESULT:

Template: 3RKO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain G - contact count / total energy / energy per contact / energy per residue : 235 -44174 -187.97 -441.74
target 2D structure prediction score : 0.89
Monomeric hydrophicity matching model chain G : 0.72

3D Compatibility (PKB) : -187.97
2D Compatibility (Sec. Struct. Predict.) : 0.89
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.408

(partial model without unconserved sides chains):
PDB file : Tito_3RKO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3RKO-query.scw
PDB file : Tito_Scwrl_3RKO.pdb: