Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSPRTQGYFFVLVTMCTWGGFTLFARLNAQWHISAWDIAALRFAIAFLILMPILIYKKD-LAFLWSKHAVILALIGGVIYCLTVYTAFLYAPAAHAAIFLNGCIPICTAIAAYILFRQPFDKHTWVSLAIMITALALMSALMLQS--STSAFGIGDLLLFISAIWWGIFTVLLKQW-KLSAWHSMASVAIWSAIIYLPIYLLFLPKHFMDADPLHLAVQSIFHGVFVVIIATLTYVAAIQRLGAFKTGSIVTLAPFIAAILAVPLLGESLSPSIVVGLVGMGIGALQPWRWFRQDSLTQKIKQQNTRN
5I20 Chain:D ((2-285))--SRSSATLIGFTAILLWSTLALATS-STG-AVPPFLLTALTFTIGGAVGIAAGLARGVG-LRQPW-PVWVHGIGGLFGYHFFYFSALKLAPPAEAGLVA-YLWPLLIVLFSAFLPGERLRPAHVAGALMGLAGTVVLLGA-AGGFGFAPEYVPGYLAAAACAVIWSVYSVASRRFARVPTEVVAGFCLATAALSALCHILFEPS---VWPVGSEWL-AVVALGIGPVGIAFYTWDIGMKRGDVRLLGVLSYAAPVLSTLLLVVAGFAAPSGALAIACALIVGGAAVATLLA----------------


General information:
TITO was launched using:
RESULT:

Template: 5I20.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1358 -258870 -190.63 -937.93
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain D : 0.72

3D Compatibility (PKB) : -190.63
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.277

(partial model without unconserved sides chains):
PDB file : Tito_5I20.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5I20-query.scw
PDB file : Tito_Scwrl_5I20.pdb: