Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSNQLPVINLMGPTASGKTALACELYERGNFELISVDSALVYKDMDIGTAKPTREEQELYPHHLIDIITPLEVYSAAQFVEDACALIDEMHSRGKTPILVGGTMLYFKALLEGLSSNLPSADANVRAAIEEKAANEGWQAVYDELVAVDPAAGVKFKVSDKQRIIRALEVYHITGQPITKLQAEQPKNVPYRYTFHNYALLPDRVE-LHQRIEQRLSKMWDIGFLSEVESLIEKYDLDENLPSMRSVGYRQALEFLLKSDMSLKKKQEMEDKALFATRQLAKRQYTWLRSLQEIHDFKTYLTIKQAKEDLRNSYG
2ZM5 Chain:A ((12-293))------AIFLMGPTASGKTALAIELRKILPVELISVDSALIYKGMDIGTAKPNAEELLAAPHRLLDIRDPSQAYSAADFRRDALAEMADITAAGRIPLLVGGTMLYFKALLEGLSP-LPSADPEVRARIEQQAAEQGWESLHRQLQEVDPVAAARIHPNDPQRLSRALEVFFISGKTLTELTQTSGDALPYQ--VHQFAIAPASRELLHQRIEQRFHQMLASGFEAEVRALFARGDLHTDLPSIRCVGYRQMWSY-LEGEISYD---EMVYRGVCATRQLAKRQITWLRGWEGVH--------------------


General information:
TITO was launched using:
RESULT:

Template: 2ZM5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1284 -133141 -103.69 -473.81
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.84

3D Compatibility (PKB) : -103.69
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.84
QMean score : 0.610

(partial model without unconserved sides chains):
PDB file : Tito_2ZM5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2ZM5-query.scw
PDB file : Tito_Scwrl_2ZM5.pdb: