Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MSDKQTTENAVDYKATLNLPDTQFAMKANLAVREVKWLEEWYTDNIYQQIRASRIGKKKYILHDGPPYANGTIHLGHAVNKVLKDIIVKSRTLAGFDAPYVPGWDCHGLPIELKVEEKVGKVGEKVDAATFRKHCREYALKQIDLQRTDFKRLGILGDWDNPYLTMNYKQEADIVRALGLIQKNGHIQPGLKPVNWCMDCGSALAEAEVEYEDKKSDAIDVGFGVVDLKDLSARVNVDVQDPTDIVIWTTTPWTLPANQAVALHAEIEYQLVQVTTERGKQNFILAK---DLVASAIE----RYKLENPVVLADFTGSALENLTLQHPLLTDRQVPVILGEHVIATSGTGAVHTAPGHGADDYKVGLQYNLKVENPVGGNGVYLPTAPIFAGEHIYKANPKIIEALGAVGRLWAHQTIKHSYPHCWRHKTPIIFRATPQWFISMDQKGLRDGALNAIENDIEFVPNWGKNRIESMIEGRPDWCISRQRTWGVPIPFFVHKDTNELHPRTPELIEEVAKLIEKEGIDAWFNRDAKDFI-------GEDAEQYNAVRDTLDVWFDSGTTHYAVLEQREELESPADLYLEGSDQHRGWFQSSLLTSMAIHNRAPYKALLTHGFTVDENGRKLSKSLGNYIPLEEIIKQLGADGLRLYVASSDYRYEIAASKEIFSRVSDSYRRIRNTLRFLLANLNGLKPSTDALAVDDLIALDQYILQRANEVQQTIIAAYEEMNFHVVCSALTSFCINDLGGFYLDIIKDRQYTTKADSQARRSAQTALYHIVQAFVRWMSPILSFTAQEAWPLIPEQTDKYVFTAEWYDLPVSSKANLLSEADWQTLISVKSAVNKQIESARNAKLVGSNLSAKVELWANESLQ-TVLNQLADELRFVLITSQV-VVHPFAEQGEATEMEGLRVQVSAAEGEKCARCWHVLPDVNTHADHPGLCGRCIVNVTGRGEVRKYA 1FFY Chain:A ((1-909)) ----------MDYEKTLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQALTKK-GVDRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYHDKRSASIYVAFNV---KDDKGVVDADAK----FIIWTTTPWTIPSNVAITVHPELKYGQYNVNGEK----YIIAEALSDAVAEALDWDKASIKLEK-----EYTGKELEWVVAQHPFL-DRESLVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQQYELPVISPIDDKGVFTEEGGQFEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFRATPQWFASISK--VRQDILDAIEN-TNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFYAENGEII--MTKETVNHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHRGVLETRPELSFPADMYLEGSDQYRGWFNSSITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDDYRKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKEESVHLA---DMPKVVEVDQALLDKWRTFMNLRDDVNRALETARNEKVIGKSLEAKVTIASNDKFNASEFLTSFDALHQLFIVSQVKVVDKLDDQ--ATAYEHGDIVIEHADGEKCERCWNYSEDLGAVDELTHLCPRC--------------

General information: TITO was launched using: RESULT: Template: 1FFY.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 4847 -5612 -1.16 -6.28 target 2D structure prediction score : 0.58 Monomeric hydrophicity matching model chain A : 0.81 3D Compatibility (PKB) : -1.16 2D Compatibility (Sec. Struct. Predict.) : 0.58 1D Compatibility (Hydrophobicity) : 0.81 QMean score : 0.370

(partial model without unconserved sides chains): PDB file : Tito_1FFY.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1FFY-query.scw PDB file : Tito_Scwrl_1FFY.pdb: