Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTESTTPKFAIPELPMQIQTIRQYLPHRYPFLLVDRVTEVTDN-SIIGYKNVSINEEFLQGHFPEYPIMPGVLIVEALAQVSGVLGFIMNNETPKPGSLFLFAGAERVRFKKQVVAGDQLVLKSELVMQKRGIYKYNCTASVDGIVAATAEIMISHQKTEQA
5BUW Chain:B ((20-163))------------THTLHIEEILDLLPHRFPFLLVDRVLDFEEGKFLRAVKNVSFNEPFFQGHFPGKPIFPGVLILEAMAQATGILAFKSRGK-LEPGELYYFAGIDEARFKRPVVPGDQMIMEVEFVKERRGLTRFTGVAKVDGEIVCTATMMCARS-----


General information:
TITO was launched using:
RESULT:

Template: 5BUW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 684 -44740 -65.41 -312.86
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain B : 0.83

3D Compatibility (PKB) : -65.41
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.629

(partial model without unconserved sides chains):
PDB file : Tito_5BUW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5BUW-query.scw
PDB file : Tito_Scwrl_5BUW.pdb: