Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRISDQVVMKLQALIEERHMKKGDRLPAERQLATSLGVSRPSLREAIQQLNSQGVLISRRGDGTYIQQLPEQWPQQLIVNPISNLIEEDPLYRFDVQEARLVLEGGTAWYAALRSTPEDRAKIHHYFNEISRHQNAGDSAQAAVADAEFHLAIAEASHNVVLIQMMRSLFDLLQYNVLLGRKKVYNDPVNGDLLSEQHFQVMDAIDRKDPEAARQAVCGHIEFVINHVRSLDEDEARQKRANRLNRVDSK
3C7J Chain:B ((26-232))-LARTVIEEKLRNAIIDGSLPSGTALR-QQELATLFGVSRMPVREALRQLEAQSLLRVETHKGAVVAPLI-------------------TEDAVDAYALRILLESEALRLSIPLLDADDLAAAASYIEQLEVE---TDFGQIGRLNRMFHLSLYAKTHNKRLMRLVEEGLNEEERFLRFN----LSSM-----SQDDHWQLLRLAEQKAVEPCVEALQYHLNRGVQAVTQYLQSQ---------------


General information:
TITO was launched using:
RESULT:

Template: 3C7J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 742 -83226 -112.16 -412.01
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain B : 0.71

3D Compatibility (PKB) : -112.16
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.535

(partial model without unconserved sides chains):
PDB file : Tito_3C7J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3C7J-query.scw
PDB file : Tito_Scwrl_3C7J.pdb: