Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRVIVLGSGVIGVASAYYLARQGAEVTVLDRQSGPAEETSFGNAGQISPGYSTPWAAPGIPFKAVKWMFQHHAPLAINLDGSMWQLQWMAQMLKNCNPQSYAVNKERMMRVAEYSRDCLRE----LRKDTGIHYENRAKGTLQLFRKEAQMEAVQRDISVLEECGVSYELLNGNELGRVEPALANAQDKLVGGLHLPNDETGDCYLFTNALAQIAKELGVNFQFNQNVEKLIVEGDQIKGVQVNGKVLTADRYVLAFGSYSRDFLKPLDLQLPVYPVKGYSLTIPIVAPAFAPQSTVLDETYKIAITR-FDQRIRVGGMAELSGFNLGLNEDRHATLQMVTQDLFP-GGDMEQASFWTGLRPMTPDSTPIIGATR-FKNLFLNTGHGTLGWTMACGSGKLISDIVLNHKTDISTDGLSIQRYSHAHAA
4YSH Chain:A ((5-371))YDVAIVGGGVIGAAIGFELAKRRHRVAIFEKGT-MGSGASSAAAGMLGAQSEFSTS--S-----------------------------------------------PLVPLALQSRALMPALAEELRERTGIDIGLVEKGLIKLATTEEEADDLYRHYTFWRGIGEPVQWLTKGEALEMEPRLA---EALAGAMYIPGDGQVSAPDLAAALAYAAASAGACLYEYTEVFDIRSDSSGH-VLDTTGGTFAAEAVVIASGAWAARLGARVGLSLSVYPVKGECVMVRAPVP-LLQTT-VFAK-NGCYIVPKSGNRLLIGATSTPGTFDRRVSAGGVMNLLHRAAHLVPDIEQAEWVASWSGIRPQTEDGLPYLGEHPERRGLFVAAGHYRNGILLSPLTGLLVADLVERKETAFDLAPFSLTRHIG----


General information:
TITO was launched using:
RESULT:

Template: 4YSH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2283 -48982 -21.46 -136.06
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -21.46
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.458

(partial model without unconserved sides chains):
PDB file : Tito_4YSH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YSH-query.scw
PDB file : Tito_Scwrl_4YSH.pdb: