Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMQIKTPDIGVDKANVAEILVKVGDRVEVDDSIVVLESDKATVEVPSTSAGVVKSILINQGDDVTEGVALIEIEAEGAAQAAPEPTPAPAAEKPGAPAPAQQTQASAQPAAATSAATVEVTVPDIGVEKALVGEILVKVGDQIDVEQSIVVVESDKATVEVPSTVAGVVKAIHLQAGQQVSQGVLLATIEAEGQAPAAAPAAKAEAAPAPQAAAPKAAAPVATQSAPAASTSGTDKLTKEQEAENAKVYAGPAVRKLARELGVILSQVKTSGEHGRVVKEDIFAYVKSRLTAPQAAPVAQATAAPAGLPSLPDFTAFGGGEVKPMTRLQQVSVPQLSLNN-YIPQVTQFDLADITELEAWRGELKDGFKKQGVSLTILAFIAKAVAHLLKEEPYFAGHLADDQKSVLLRNEIHMGIAVATPDGLTVPVLRNPDQKSIKQIAVELGELSKKARDKKLTPKDLQGANFTITSLGSIGGTAFTPLVNWPQVAILGISPATMQPVWNGKDFDPRLMLPLSLSYDHRVINGADAARFTNKLTKLLKDIRTLLI
1DPD Chain:A ((405-637))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KYGEIEEVPMTRLMQIGATNLHRSWLNVPHVTQFESADITELEAFRVAQKAVAEKAGVKLTVLPLLLKACAYLLKELPDFNSSLAPSGQALIRKKYVHIGFAVDTPDGLLVPVIRNVDQKSLLQLAAEAAELAEKARSKKLGADAMQGACFTIASLGHIGGTAFTPIVNAPEVAILGVSKASMQPVWDGKAFQPRLMLPLSLSYDHRVINGAAAARFTKRLGDLLADIRAILL


General information:
TITO was launched using:
RESULT:

Template: 1DPD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1057 -30972 -29.30 -133.50
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -29.30
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.470

(partial model without unconserved sides chains):
PDB file : Tito_1DPD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1DPD-query.scw
PDB file : Tito_Scwrl_1DPD.pdb: