Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSLVVPAEHPETVHNETDRVERILVVDDDVRLRTLLQRFLEDKGFVVKTAHDASQMDRLLQRELFSLIVLDFMLPVEDGLSICRRLRQSNIDTPIIMLTARGSDSDRIAGLEAGADDYLPKPFNPNELLARIRAVLRRQVREVPGAPSQQVEVVSFGPWSLDLSTRTLTREGQIVTLTTGEFAVLKALVQHPREPLTRDKLMNLARGREWGAMERSIDVQVSRLRRLIEDNPARARYIQTVWGVGYVFVPDGAE
2GWR Chain:A ((6-227))--------------------QRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMNGIDVCRVLR-ADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRRN-------DDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQVWGYR--ADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGP----


General information:
TITO was launched using:
RESULT:

Template: 2GWR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1093 -158021 -144.58 -718.28
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -144.58
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.626

(partial model without unconserved sides chains):
PDB file : Tito_2GWR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GWR-query.scw
PDB file : Tito_Scwrl_2GWR.pdb: