Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTEGVGLPLWLLAELT-YRCLLQCPYC------SNPLDYAQHKNELTTQEWFDVFDQARQMGAVQLGFSGGEPLV--RQDLEQLVAHAHQLG-----FYTNLVTSGMGLTEQRISHLKQAGLDHIQISFQASDPVLNDAL--AGSKHAFEQKYEMCRLVKKYDYPMVLNFVIHRHNIDQIDKIIELCLELNADTVELAICQFYGWAFLNRQGLLPTQEQLIR-AERITNEYREKLKAQNHPC--KLIFVVPDYYEERPKAC-MNGWGKIFFTVAPDGMALPCHAARQLPISFPNVREQSLSRIWYESTGFNRFRGDAWMPEGCRSCPDKDRDFGGCRCQAYMLTGDASNADPVCGKSPYHQFIEQARAESEIDSSLEKLVFRNSRNSKQFTVQQNIPVQNIVDD
4K36 Chain:A ((2-392))------PPLSLLIKPASSGCNLKCTYCFYHSLSDNVKSYGIMRDEVLESMVKRVLNEAN--GHCSFAFQGGEPTLAGLEFFEKLMELQRKHNYKNLKIYNSLQTNGTLIDESWAKFLSENKF-LVGLSMDGPKEIHNLNRKDCCGLDTFSKVERAAELFKKYKVEFNILCVVTSNTARHVNKVYKYFKEKDFKFLQFINCLDPLYEEKGKYNYSLKPKDYTKFLKNLFDFWYEDFLNGNRVSIRYFDGLLETILLGKSSSCGMNGTCTCQFVVESDGSVYPCDFYVLDKWRLGNIQDMTMKELFETNKNHEFIKLSFKVHEECKKCKWFRLCKGGCRRCRDSKEDSALELNYYC--QSYKEFFEYAFPRLINVANN----IVDKLAAALEHHHHHH--------


General information:
TITO was launched using:
RESULT:

Template: 4K36.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1915 -2176 -1.14 -6.03
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -1.14
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.358

(partial model without unconserved sides chains):
PDB file : Tito_4K36.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4K36-query.scw
PDB file : Tito_Scwrl_4K36.pdb: