Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKILGIASLIMSTGVVHAEQLNEQEQISPYSVNVTFASQYISRG--FQQTWGKPALQIGLDYANPNGLFVGTWASNVSSNYLRDASVEWDFYAGYLKTIDKFSIGMSVYYYYYPGAKSTPETGSTNYNYGEIVPQIGYGPLSLKYFITYTPDYAGYNSNTMGG-------PEGKRSRGTTYLDLNFTQPINESWTFGAHYGYERIKN----FSEANFQDMKVELIKDLGDGWTTGLAYTKAWDKDGYYRNYSNGESDAPISNPIDSTFTVSVKKVF
4A3Y Chain:A ((270-448))--------------GISHATQWME-----PWDENSASDVEAAARALDFMLGWFMEPITSG-DYPKSMKKFVGSRLPKFSPEQSKMLKGSYDF------------VGLNYYTASYVTNAS-------NFSYNTDI------------HVTYETDRNGVPIGPQSGSDWLLIYPEGIR-KILVYTKKTYNVPL----IYVTENGVDDVKNTNLTLSEARKDSMRLKYLQD-------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4A3Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 636 14624 22.99 91.97
target 2D structure prediction score : 0.43
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : 22.99
2D Compatibility (Sec. Struct. Predict.) : 0.43
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.015

(partial model without unconserved sides chains):
PDB file : Tito_4A3Y.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4A3Y-query.scw
PDB file : Tito_Scwrl_4A3Y.pdb: