Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRFGMPKLISEKNQLQQLSLNSNGGVVYQPARGFFKVVYQGLILPNLPAPLRYFNYISLIGQPRIPLCYNTNGILTSAVDTATVLVSNSLHSVGHLKTYSIRRQCQLNPSRYQFDKTDLIEWQ-IPRVQLRRIDSEMSCDLIVQTPSDISNSSA---LQWG------ISDYWSILCHCEGEILYKGQKYEVNGLGRFKHARALHLPFLSLCFYTCQIINLNETTQVTLSQIRNQWNIILF-SRLDIQELGKQPLTFT-EDVNFHIHRVYPKVETPHGREMYLPREFSWQCKKNGKVIFELYGESRGDYK-FG---LAAGYIGSFRYQLSWNDQCLQGEGGYCEYIDCRPLRWQEKNQNEKMLDKLLLLQPCLYKKT
2ICH Chain:A ((106-329))--------------------------------------------------------------------------------------------------------------DVKLDDW-IFVRETDGRYRTRIEAEDFTLTFILTPSQPLMLQGENGFSRKGPGAPQASYYYSEPHLQVSGIINRQGEDIPVTGTAWLDREWSSEYLDPNAAGWDWISANLDDGSALMAFQIRGKDDSKIWAYAALR-DASGHTRLFTPDQVSFHPIRT---WRSART-QAVYPV--ATRVLTGE-TEWQITPLMDDQELDSRASAGAVYWEGAVTFT--RDG-Q-PAGRGYMELTGY-----------------------------


General information:
TITO was launched using:
RESULT:

Template: 2ICH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 926 809 0.87 3.89
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : 0.87
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.292

(partial model without unconserved sides chains):
PDB file : Tito_2ICH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2ICH-query.scw
PDB file : Tito_Scwrl_2ICH.pdb: