Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSQVKIYANERTIIQYRELLSHAIHQALIEELKYPVEKRFQRFISLKPENFIYPSDRSQHYIIIELSMFAGRSPATKKQLIQTLFRNIEEQCKIAPQDIEITIFETPKENWGIRGKNADELLLNYQVNI
4LKB Chain:F ((25-142))--QIKVYGLAEKLNPIKAELSNILHTSLIEVLQISPEKRFHRFFPLDKLDFYYPSDRTDNYLIIEIIMFEGRSVETKKQLLRDIFKKVDEKFGISVYDIEITLFEIPKQNWGIRGIPGDE---------


General information:
TITO was launched using:
RESULT:

Template: 4LKB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain F - contact count / total energy / energy per contact / energy per residue : 447 -65510 -146.55 -555.17
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain F : 0.82

3D Compatibility (PKB) : -146.55
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.655

(partial model without unconserved sides chains):
PDB file : Tito_4LKB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4LKB-query.scw
PDB file : Tito_Scwrl_4LKB.pdb: