Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMPDPKKFERTLDRFGHYAVEAFHYLALFIIGCMIAWSAA----HTVFEILTVKKYASIDDILLLFIYLELGAMVGIYFKTNHMPVRFLIYVAITALTRLMISDIQHDHKADLDQVIITGSILILALSILVVRFASWHYPSVMKEKHSKTPTSLKTPQPQDDELA
4YBO Chain:A ((260-345))-------------FGHRVYKTYDPRAKIFKGIAEKLSSKKPEVHKVYEIATKLEDFGIKAFGSKGIYPNTDYFSGIVYMSIGFPLRNNIYTALFALSRV-----------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4YBO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 266 -36985 -139.04 -451.03
target 2D structure prediction score : 0.45
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -139.04
2D Compatibility (Sec. Struct. Predict.) : 0.45
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.209

(partial model without unconserved sides chains):
PDB file : Tito_4YBO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YBO-query.scw
PDB file : Tito_Scwrl_4YBO.pdb: