Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSLLRLDRLHYCILMSMGCISSPLVWAEDLNSDVAKLPTLHVEATRTDTGYLQTPASVFRIEAPQVDSSSQVNLTEVVKGIPSLQIRNRENYAQDLQLSMRGFGARSTFGVRGIRLYVDGIPATMPDGQGQTSNIDLSSLDHVEVLTGPFSSLYG-NSSGGTILTSTKEGQGKDSIELSYSGGSHDKSRAGLVLQGGAKGANEPSYIISSSYFDTDGYREHSGAEKVLNNAKLSWNLDDGSKINWVTNYVKINADDP-GGLTRADWQNNPKQVVQNVL-DYNARKEIEQTQTGLTWSKPINDQHELYAMTYMGQRQVTQYQSIPDT-VQKN-PNTPYQAGGVIDFKRNYYGADFRWTGKEL-LPN-TTLSIGVALDAMKEDRQGYQNFNDT--GD----KGV-------KGALRRDEDNTLWNIDPYVQASWQFLPTWRLDTGVRYSNVHYKSKDYYIVGLNGDNSGKTSYEEVLPSVALSWQITPEVLAYASYAKGFETPTFTEMAYPAQGGASTLDLKPSTSDTYETGLKSQ-N-QLGDFTLAVFQTKTKNDIVSAESFG---GRSTFRNADKTLREGVEFAWNKKLWRDLIAIASYTYLDATFDSTVPAAGKISEIPEGNAIPGIAKNQAYVSLAWQPS---HGLYGGVDVQYMDKVYVNDT-NSDAAPSYSVTSANVGYAWVMGDWKVNSFARVDNLFDRNYAGSVIVNDSTQPVGRYFEPADGRNWSAGLRVIKQF
1XKW Chain:A ((3-665))--------------------------------TSATQPPGVTTLGKVPLKPRELPQSASVIDHERLEQQNLFSLDEAMQQATGVTVQPFQL--LTTAYYVRGFKV--------DSFELDGVPALLGN--TASSPQDMAIYERVEILRGSNGLLHGTGNPAATVNLVRKRPQREFAASTTLSAGRWDRYRAEVDVGGPLSASGNVRGRAVAAYEDRDYFYDVADQGTRLLYGVTEFDLSPDTLLTVGAQYQHIDSITNMAGVPMAKDGSNLGLSRDTYLDVDWDRFKWDTYRAFGSLEQQLGGGWKGKVSAEYQEADSRLRYAGSFGAIDPQTGDGGQLMGAAYKFKSIQRSLDANLNGPVRLFGLTHELLGGVTYAQGETRQDTARFLNLPNTPVNVYRWDPHGVPRPQIGQYTSPGTTTTTQKGLYALGRIKLAEPLTLVVGGRESWWDQDTPAT----------RFKPGRQFTPYGGLIWDFARDWSWYVSYAEVYQP-----------------PLSPVEGKTYETGIKGELADGRLNLSLAAFRIDLENNPQEDPDHPGPPNNPFYISGGKVRSQGFELEGTGYLTPYWSLSAGYTYTSTEYLKDSQ------NDSGTRYSTFTPRHLLRLWSNYDLPWQDRRWSVGGGLQAQSDYSVDYRGVSMRQGGYALVNMRLGYKID---EHWTAAVNVNNLFDRTYYQSLSNP------NWNNRYGEPRSFNVSLRGAF--


General information:
TITO was launched using:
RESULT:

Template: 1XKW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 3763 132645 35.25 212.57
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : 35.25
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.196

(partial model without unconserved sides chains):
PDB file : Tito_1XKW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1XKW-query.scw
PDB file : Tito_Scwrl_1XKW.pdb: