Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMDLFLNRKSFVVKSLAITVTALMMSGANAATSDKEEIRKLRQEVEALKALVQEQRQVQQQQQQVQQQQQVQLAEVKAQPQPAAAPASPLASLKSKTGADVNLYGFVRGDANYIIEGADNDFADVSKSNGKTQDKLRATAKTTRLGLDFTAPV-SGAKVGGKIELDFASSDND---KSENVRIRHAYLTYN-----NWLFGQTTSNFLS-SHAPEMID-FSTNI-----GGGTTRIPQVRYNYK-LA---PATQLFVSAEEGNSSATGDSVKYRLPVLTAKVTQGYADGNGNASARAFVENYKSGA-------GDDKTGWGIAAGTDFKVSDPLKLFADASYVVGNSNYLYGSNSAYTLVNDNIEQNEFVAVQVGGTYKILPNLRSTLAYGAQFADDGTDYAKNNVTANEKVQQAWINFIYTPVKPIDLGVEYVNGKRDTFEG-KSYKDNRVGLMAKYSF
2ZFG Chain:A ((5-340))----------------------------------------------------------------------------------------------NKDGNKVDLYGKA-VGLHYFSKG-GEN-----------SYGGNGDMTYARLGFKGETQINSDLTGYGQWEYNFQGNNSEGADAQTGNKTRLAFAGLKYADVGSFDYGRNYGVVYDALGYTDMLPEFGGDTAYSDDFFVGRVGGVATYRNSNFFGLVDGLNFAVQYLGKNERD--TARRSNGDGVGGSISYEY--EGFGIVGA--YGAADRTNLQEAQPLGNGKKAEQWATGLKYDAN-NIYLAANYGETRNATPITNKFT------NTSGFANKTQDVLLVAQYQFDFGLRPSIAYTKSKAKDVEGI-----GDVDLVNYFEVGATYYFNKNMSTYVDYIINQIDSDNKLGVGSDDTVAVGIVYQF


General information:
TITO was launched using:
RESULT:

Template: 2ZFG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1663 51287 30.84 167.06
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : 30.84
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.134

(partial model without unconserved sides chains):
PDB file : Tito_2ZFG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2ZFG-query.scw
PDB file : Tito_Scwrl_2ZFG.pdb: