Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence ----------------------------------------------------------------------------------------------MFYKHTSLLAERITAHGALPNTSYWRGFFFSGVCMTEFQKITHEIRQLQVELNHLGSCNTKGLTTEQIAHLDERFFLAIAKQNKLLARLNNKPEGFL 5LNK Chain:Z ((3-173)) SWDKDVYPEPPRRTPAPSPQTSLPNPITYLTKAFDLLVDRPVTLVREFIERQHAKNKYYYYHREFRRVPDITECHEKDVLCMFEAEMQWKRDYKVDQEIVNIIQERLKACQQREGESHRQN------CAKELQQFTQVVKAYQDRYHDLG------------AHYSARKCLAKQKQRMLAERKATKEAA--

General information: TITO was launched using: RESULT: Template: 5LNK.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain Z - contact count / total energy / energy per contact / energy per residue : 26 528 20.29 6.85 target 2D structure prediction score : 0.65 Monomeric hydrophicity matching model chain Z : 0.59 3D Compatibility (PKB) : 20.29 2D Compatibility (Sec. Struct. Predict.) : 0.65 1D Compatibility (Hydrophobicity) : 0.59 QMean score : 0.424

(partial model without unconserved sides chains): PDB file : Tito_5LNK.pdb: (Unconserved sides chains are recalculated) : Sequence: align-5LNK-query.scw PDB file : Tito_Scwrl_5LNK.pdb: