Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFDHIAQPISY-QHIELSFPVHLDIKRLDLVHPQISGNKFFKLKYNLLAAKEQGLSSILTFGGAYSNHIAATAYAAHLFGLKSIGIIRG-EELAGKPLNPTLAKAQSLGMQLHFVSRHEYRLRDEANYL-KQLQQQFPQTYIIPEGGTNELA----VQGCQEILSQYDLEQYDVICCAVGTGGTISGL-IERSAAHQKV--LGFSALK-GDFLQQEIKQWTKKQNWSL---TDV------YCWGGYAKTSPELFTFIENFEEQYTVPLEPIYTGKMMFGLFDLIKNNYFPANTRILAIHSGGLQADIRNRSHA
1J0A Chain:A ((23-313))-------PIQYLPNISREIGADVYIKRDDLTGLGIGGNKIRKLEYLLGDALSKGADVVITVGAVHSNHAFVTGLAAKKLGLDAILVLRGKEELKG---NYLLDKIMGIETRV-YDAKDSFELMKYAEEIAEELKREGRKPYVIPPGGASPIGTLGYVRAVGEIATQSEV-KFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGIAVGRFGEVMTSKLDNLIKEAAELLGVKVEVRPELYDYSFGEYGKITGEVAQIIRKVGTREGIILDPVYTGKAFYGLVDLARKGEL--GEKILFIHTGGISG--------


General information:
TITO was launched using:
RESULT:

Template: 1J0A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1495 -30624 -20.48 -113.00
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -20.48
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.447

(partial model without unconserved sides chains):
PDB file : Tito_1J0A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1J0A-query.scw
PDB file : Tito_Scwrl_1J0A.pdb: