Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSAITPYDWAIIAFVIGVTFLCVFMLTVPLLLGGKSWGRAKQEQFESGVVSAGGARIRLSAKFYLVAIFFVVFDLEALYLYAWSTSVREVGWLGYTTVVIFVVDLLIALVYAFSVGALSWAPADRRKLAGEKIKVGSPTMNIAEITRFNSIEELVTDPTGQIPAQSSGRVKSKTTPALSSEKE
3RKO Chain:A ((15-126))---------AFAIFLIVAIGLCCLMLVGGWFLGGRARAR-----------------LRLSAKFYLVAMFFVIFDVEALYLFAWSTSIRESGWVGFVEAAIFIFVLLAGLVYLVRIGALDWT--------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3RKO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 138 -30070 -217.89 -316.52
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -217.89
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.72
QMean score : -0.003

(partial model without unconserved sides chains):
PDB file : Tito_3RKO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3RKO-query.scw
PDB file : Tito_Scwrl_3RKO.pdb: