Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQQMWTDIDEYIDSHLIPEDPRLDFALKNTDEHGFSNHLAVAPNQGMFLQMLIQMNKCKRVLEIGTFAAYSTIWLGRALPEDGYLLTIEGRDTHAEMAQKNIDHANLPVKVDLKLGRAADVLSAIDPQSIEPFDFIFIDADKQGYPEYLELSLKFSKSGTIIVLDNVIRAGAILNPENKKPSIEGIRETFKALENHPQILSCTALQTVGSKGHDGFAIAIVK
3TFW Chain:A ((6-223))MQQQWSAVDNYLIKALIPGDPVLDRVLENNHRAGLP-AHDVAANQGQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLG--ECPAFDLIFIDADKPNNPHYLRWALRYSRPGTLIIGDNVVRDGEVVNPQSADERVQGVRQFIEMMGAEPRLT-ATALQTVGTKGWDGFTLAWVN


General information:
TITO was launched using:
RESULT:

Template: 3TFW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1115 -118635 -106.40 -544.20
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.85

3D Compatibility (PKB) : -106.40
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.85
QMean score : 0.588

(partial model without unconserved sides chains):
PDB file : Tito_3TFW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TFW-query.scw
PDB file : Tito_Scwrl_3TFW.pdb: