Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAEFIAVILITILAVISP--GADFAIVTKNSYLYGRKIGVFTSLGISLGVLVHVTYTLVAVAFVMTYTPQILNIVKYIGALYLIYIGYKTFTQKPVL-E----T--T--ALTAIGTFQAIKYGFFTNA-LNPKTTLFVISTYTQIVSLTTPKSILLAYGFFMSFAHFVWFSLVAVLFSSMLLRQKMLAKQVQINRVIGSILCVLGVILLFTKFQ
2N4X Chain:A ((14-198))------AFALGILSVFSPAVLPVVPLIFAGS-RGRALDAFLIVAGLTISMLILGYTASLF-F----------GFFRVVAMLFLLIFALILLSDELDEKVSIFASRMTSGLSWKIQTLPSFFFGMLLAFLWLPAILPFAGIAISQTLLSE-N---P-LVMLSYGLGMAVTIAAVFKMGEK--FVK---ANFQLIRKVTGAIVLLYLAYFALTEV-


General information:
TITO was launched using:
RESULT:

Template: 2N4X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 594 -82955 -139.65 -479.51
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -139.65
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.122

(partial model without unconserved sides chains):
PDB file : Tito_2N4X.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2N4X-query.scw
PDB file : Tito_Scwrl_2N4X.pdb: