Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKLSIGLIIMLSLFGCTDSKAKNQEKFLTHIHNNTPEPYKECMVMYIKNHWDDVWKTYDSEKVREARGETDIVNFMIERFLPECKK
1N8V Chain:B ((57-95))---------------KCTENQEKGAYRVIEHLIKNEI------------EIWRELTAKYDPTGNWR---------------------


General information:
TITO was launched using:
RESULT:

Template: 1N8V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 49 -3018 -61.59 -77.38
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain B : 0.55

3D Compatibility (PKB) : -61.59
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.55
QMean score : 0.623

(partial model without unconserved sides chains):
PDB file : Tito_1N8V.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1N8V-query.scw
PDB file : Tito_Scwrl_1N8V.pdb: