Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFVIWEVVKSRVQEMNEHFSVSFAENPSKYFRRLVFLLILSLLLTVAMFLLPEKIREEQVNSLVYSSIPTSKLKPFDYSKADQKIKQ---SRAISVMFSKPNGKTYQDMLDVFNDPELMEEL--NRPIFYYPIVYDVHEL---EQKYNIRTDEVTFIFFDGGKEANRITAGKGGITDFDKELIPELNRLPLANIKQLEEELDRTGVTSQNSEIAN
2MOD Chain:A ((18-119))-------------------------------------------------------------------GPGSMIEQIGDSEFDNKVTSCNDNILILVDFWAPWCGPCRSLEPQLE--KLAQQYTENVKIYK----INIEDNQDVATQYGVSA-IPTILMFKNGKKLSQVIGA--DISKI-------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2MOD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 342 -9448 -27.63 -100.51
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -27.63
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.587

(partial model without unconserved sides chains):
PDB file : Tito_2MOD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2MOD-query.scw
PDB file : Tito_Scwrl_2MOD.pdb: