Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNIIKIRHPYQSEQIPEDDVVLVLGFFDGVHIGHQKVIKTGMEIAQKEGLKLALMTFNQHPSIVFKKIDPSSVKYLTSLKQKEEKMAALGIDYLYEVDFTSSFAHLAPQEFVDQYIVGLHAKYAVSGFDYTYGPKDIADVAHFPEYAKGRFKIVTVSKEEEQGEKISSTRIRGLLDSGQVKEAAKLLGCTYEVEGVVVHGDARGRLLGFPTANVKVKSTVHLPKEGVYVSEIKIGETWYPAMGSIGHNDTFGEGRELTVELYILDFNQDIYGEHVAVRWNQFLRDQVKFSSVEELIEQLKEDEQATAEYFSQQ
3OP1 Chain:A ((5-307))--IITIPIKNQKDIGTPSDSVVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNESPKIALEPYHPDLFLHILNPAERERKLKREGVEELYLLDFSSQFASLTAQEFFATYIKAMNAKIIVAGFDYTFG-SDKKTAEDLKNYFDG--EVIIVPPVEDEKGKISSTRIRQAILDGNVKEAGKLLGAPLPSRGMVVHGN------GYPTANLVLLDRTYMPADGVYVVDVEIQRQKYRAMASVGKNVTF-D--EARFEVNIFDFNQDIYGETVMVYWLDRIRDMTKFDSVDQLVDQLKADEEVTRNW----


General information:
TITO was launched using:
RESULT:

Template: 3OP1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1534 -177802 -115.91 -602.72
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.80

3D Compatibility (PKB) : -115.91
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.531

(partial model without unconserved sides chains):
PDB file : Tito_3OP1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3OP1-query.scw
PDB file : Tito_Scwrl_3OP1.pdb: