Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMYKVFIIEDEYLIRNNLREQITVLGSYYPITYVGEAGDGEMALSSIIDLQPDIILTDIQMPFMDGLTFSKEARKLLPWTRLIFISGFDDFDYMKGAIQVQADDYLLKPIKSSELKQAIEKAVTALDLQQKETHTSSDLVFELKKNHFLNGLFKGSLTISETLKLAESFNRSLAGKKMTVLLAANQVSTDFEDYAHLSDYLKFLFRENQQVIFSAVSSRFIKFLIVDSLEENVIETSYQVAQTLVHELEKGQKNNFSVAIGPVAERISELPASFEITQMILETASSLKEQIISYEDLIQEAKLPVDSVFYFDLSLDLSSLSKNEVSKYIEHLTKPQGTPTRTRLYRLFVLTKLLQHVCLKEKKIPQEMVHCTSTSQRLAISADDSLYRSTVYMFISFLTALPSQPSRNKYQPILNHALDFIKENFTDPDMSLTWVAQQVALSPSHFSTIFSQSFNQTFIDYLTEQRIELAKKLLQQSDYRISDIAFEIGYNDPNYFSYLFKKKQGISPKEYRTQLFLKNKNN
1NY5 Chain:A ((1-384))-MNVLVIEDDKVFRGLLEEYLSMKGI-----KVESAERGKEAYKLLSEKHFNVVLLDLLLPDVNGLEILKWIKERSPETEVIVITGHGTIKTAVEAMKMGAYDFLTKPCMLEEIELTINKAIEHRKLRKENELLRREKDLK----------EEEYVFESPKMKEILEKIKKISCAECPVLITG--------------------------------ESGVGKEVVARLIHKLSDRSKEPFVALNV----------------------ASIPRDIFEAELFGYEKGAFTGAVSSKEGFFELAD---GGTLFLD---EIGELSLEAQAKLLRVIESGKFYRLGG------------------RKEIEVNVRILAATNRNIKELVKEGKFREDLYYRLGVIEIE----------------IPPLRERKEDIIPLANHFLKKFSRKYAKEVEGFTKSAQELLLSYPWYGNVRELKNVIERAVLFSEG--------------------KFIDRGELSCLV-------


General information:
TITO was launched using:
RESULT:

Template: 1NY5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1813 -197699 -109.04 -514.84
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -109.04
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.345

(partial model without unconserved sides chains):
PDB file : Tito_1NY5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1NY5-query.scw
PDB file : Tito_Scwrl_1NY5.pdb: