Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSSSAGDYGESYQRSDERNELASSGEKSENAAYGWPSEMLNACTDFSAPQSSYQLNAQTPPPFAPFAPSPLSRPASQSAPTQQRSEGTPLQAETARKHGSSLRAHTSTFQSTLSSAAPSLGSGELSSSPFPHRHSDTYERPLPPEALGARQLVDYIFTPHSPGRPHSSLSPPSVVPRPSPREIGWPMPLLAEPVNPSSGRRLVFFGKGQQPQFVLGEKKNRFIAVTFKPILSVAAAAVVSAAPELGDTSTTTGYASYGTVLGYSDDNTKIVWHDRSERFASYVSLSSIQSIHRASAMQCRHCGFVLLKQELREHMNTHKKGSGVEYGVFTDDESLGMLCGDSGLMQNLASPRRLGEGAQGVVDLMEVVQPTMEEVAQAGPSSAAYRFVSEHLSHESRLQKVVLKSMHFSSEAKALDEYQKSVRFMTVMQHPHLVEYLAVQLKPDRRTVCICMPYYQEGDVGAMIRSFRGDHFDESFVCSVALQLSLALAFLHERNPPIVHGDLKVENAMFYNNKQQIVLTDLDASREVLGGYQEAVQSSLGTTAYMAPETLKVERLMPSSDMWSLGVFLYVLTVLPDFPMILNPNTQNLDLLNADCWATEEDLRAMESYSSALNDGHSNAPSVNAGSGNCGITLGECVRANITRKGYSRDLAQLVVDLLSYNPLKRPTAEVVGCRLTEIMTDYLLEF
5U9D Chain:A ((12-268))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KDLTFLKELGTGQFGVVKYGKWRGQ----------------------------YDVAIKMIKEGSM--SEDEFIEEAKVMMNLSHEKLVQLYGVCTK--QRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESKQ--FLHRDLAARNCLVNDQ-GVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE--------H-------------IAQG-----------------LR-----LYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD------


General information:
TITO was launched using:
RESULT:

Template: 5U9D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1332 -175783 -131.97 -683.98
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -131.97
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.410

(partial model without unconserved sides chains):
PDB file : Tito_5U9D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5U9D-query.scw
PDB file : Tito_Scwrl_5U9D.pdb: