Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNPSSKRHAYEPLPQQQQQQHPTNPPPAYQHHRVSTGTGRESPALPQLSPNSMSAVTNIAEPSSSPALISTSAASSNLVPIFQGREDSAAASRRGGDGNSEVHPHPAEVSETYPGASTAAAQSMALAVVPFTGTSGVGVGVSAPQRCDPRVGGADQEGKNTGVGGDDVGYYSGPSPYGKLAPLSLSTERVCPHCLRPYDVFDDGEGVFDPATFFRVDATTRSSSIQPSPSHPKLLPPPSHEGDEQQKQQPSTSPRLYTEGAGDGGAAAGQLLCSRSSTAAGLDDSSSDGTNRSGNYITAVHPPAAAFTSHYFRALPPPSFIIAAGARGASAPLAIEDYRPSPLIGSPRDEKVEARQPFALAPALASDNGGGGGNSSGTLVCKVAAVPHYSYVWPITCTGMRSQVRLLQQGDSSEKTAAEMEGGKEESPSCESGSPVCSPTAATPSPNNGYYRHYFKELRQLGRGTYGGVYLCRHVMCGVNLGEFALKKIPVGDKVTYLQSVLREVRILEEVRRHPNVVEYKHSWVEEAQLADFGPPVRCLFILMEYASAGSLDTYLERYGNNLSTLAVWYFFLSSVAGTAHLHEKHILHRDLKPQNLLLAATKDRPPRVLVSDFGTAALLDDILYDRSGGTGTLEYMAPELLETTASPRGANERYVNHHTMASDVWSLGMVLHYLAFDGALPERHEDGSVNLDKAR-------HSANARPPEMLRLLEAMLQLDPAKRPRCCDILASPMVQSIMRIFNKDDHSQWDLSIQRQQQLSATSPSAILPLERPPRPPVPAPAPRSAPLNALEAHSIDDSSSPRGARSRNAIAAISTSSQGRGVRADSTNLEDKSNTLQSSRVELLSASTLVDLSTAMARAGSSSSSNGSPLAMKLPPPRPSTVISQHGRQQQQRAHVVAGLPKTLASSNTFQFSDSPSPRRVNVGVQTNPVVIVEKQQRHA
4XBR Chain:A ((94-350))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYLDNFIKIGEGSTGIVCIATVRSSG---KLVAVKKMDLRKQ-QRRELLFNEVVIMRDY-QHENVVEMYNSYLVG----------DELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHD----GRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRL------------PYGPEVDIWSLGIMVIEMVD-GEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4XBR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1228 -114303 -93.08 -457.21
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -93.08
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.441

(partial model without unconserved sides chains):
PDB file : Tito_4XBR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4XBR-query.scw
PDB file : Tito_Scwrl_4XBR.pdb: