Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQVDIGNNTVLQNFSSIVSSAEIRQLNDRLQQAYAGAAPAQATAAGHQEGGEPGTVLSQRRVYHNAVEGAAGAPSSHPNVSRLRRRSSLNLSRSSAGSRHSYHHYQGRQHGSTPRSRSGHSQSPEQPALWPQQATLGVSHIAAVTRITTPANSSTAVNNASVPSRANISGIPRILNSHVVQPPHLQQLLAPPQQTPAVFGGIGPSPAPMATVTSTPHRQQGWPDAAQDKGGAASPAGAVDGAPVCAGDNRSKGMFGKEGDGNCRRDEGSGPHGGGDARSRNCNDKPAAAASPKLAHTKIQVGMRLRRWIIINRIGAGSFGETFTAMEVDGPAEEEDSLTVASENMKLLENLPPVEERNEVCIKVEQENKNVLRLEALALKKVQPCPQVVRYLGSGCTNGMNYLVMEKLGSNLAELRRRSQHGTFNIYTTLKAGVSCLTAIRGVHDLGLVHRDIKPSNFVTGLPGTPDHTTCYLIDFGLARRFRRSNGEIRPPRENAGFRGTSRYASVASHHHQELGRVDDLWSLLFMLVEFATGTLPWRKYKEKDDIGRCKEESISPHLVRNLPREFQPFLAHLQTLRYEDEPDYDLLLTLMHRALERRGYPPNKPVEWEIDSSLADSCIDADGAPVVNAGAGAVQGSAAHLRDVGPAPDAAGNGHSIDGNASGRPLQPPPRRAAPLPGAVEMGSRELLHMPLHPDAAQPNSVASRVGSGNGAAGNGATASGYPADALHPHNSGTLRVSEVDIGGSGACQDSMHGNPPVGVDVSVQNRGPRPQGDSVDIPLTTACLAAEGSESPRAQASSGEYDHNEYSLRENGSGAYSPPMAPVSYFNAAVASGADPPGSSPAAGSLANSALEPNNATHWRETAAERNGLKRRSGQQQRENECDIPDITKRGAGRWHQHMVGPTADLDASVAADEQGEAHYGKDGKASSKKKLQCECVVM
4BTM Chain:B ((54-336))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VKDRWKVLKKIGGGGFGEIYEAMDLLTR------ENVA---LKVES---------------AQQPKQVLKMEVAVLKKLQGKDHVCRFIGCGRNEKFNYVVMQLQGRNLADLRRSQPRGTFTLSTTLRLGKQILESIEAIHSVGFLHRDIKPSNFAMGRLPS-TYRKCYMLDFGLARQYTNTTGDVRPPRNVAGFRGTVRYASVNAHKNREMGRHDDLWSLFYMLVEFAVGQLPWRKIKDKEQVGMIKEKYEHRMLLKHMPSEFHLFLDHIASLDYFTKPDYQLIMSVFENSMKERGIAENEAFDWEK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4BTM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1440 -140459 -97.54 -496.32
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain B : 0.66

3D Compatibility (PKB) : -97.54
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.446

(partial model without unconserved sides chains):
PDB file : Tito_4BTM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4BTM-query.scw
PDB file : Tito_Scwrl_4BTM.pdb: