Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----------GCPYSIKRYGEEVKWDIIEAGTSHIRVVNGI--------GATIIAKKNCKLS----------------LKGLPRFEYTISRGDSINRQS-----------------------------------------------------------------------------------------------
4B8V Chain:A ((36-224))CGSTSNIKYTVVKGDTLTSIAKKFK-----SGICNIVSVNKLANPNLIELGATLIIPENCSNPDNKSCVSTPAEPTETCVPGLPG-SYTIVSGDTLTNISQDFNITLDSLIAANTQIENPDAIDVGQIITVPVCPSSQCEAVGTYNIVAGDLFVDLAATYHTTIGQIKALNNNVNPSKLKVGQQIILPQDCKNVT


General information:
TITO was launched using:
RESULT:

Template: 4B8V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 238 -12222 -51.35 -207.15
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -51.35
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.313

(partial model without unconserved sides chains):
PDB file : Tito_4B8V.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4B8V-query.scw
PDB file : Tito_Scwrl_4B8V.pdb: