Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--ECWVELFGPGKVSHGKQTGRWNAPYY------FNLDPMRLI-YLHENCKVNEKHTVLLPDNVKWDVETGMIS
1LVA Chain:A ((135-198))FSETQKKLLK--DLEDKYRVSRWQPPSFKEVAGSFNLDPSELEELLHY--LVREGVLVKINDEFYWHR------


General information:
TITO was launched using:
RESULT:

Template: 1LVA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 119 5734 48.18 104.25
target 2D structure prediction score : 0.33
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : 48.18
2D Compatibility (Sec. Struct. Predict.) : 0.33
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.057

(partial model without unconserved sides chains):
PDB file : Tito_1LVA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1LVA-query.scw
PDB file : Tito_Scwrl_1LVA.pdb: