Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence------CFVAIVSDDPRGP--VLASKRFEGNREVSFDGYDIVLELGWD---CYAIKKSGTIPHGYHINIAS---GVDEPRVGVCNVYNDRTEPRRRNLHT---QPTSN--------
1IFR Chain:A ((1-113))GSHRTSGRVAVEEVDEEGKFVRLRNK---SNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGAGATHSPPTDLVWKAQNTWGCGNSLRTALINSTGEEVAMRKLV


General information:
TITO was launched using:
RESULT:

Template: 1IFR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 344 26532 77.13 301.49
target 2D structure prediction score : 0.83
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : 77.13
2D Compatibility (Sec. Struct. Predict.) : 0.83
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.509

(partial model without unconserved sides chains):
PDB file : Tito_1IFR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1IFR-query.scw
PDB file : Tito_Scwrl_1IFR.pdb: