Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----------LCTIDILFRGRRVTFRNIPSGSFQQTEVQGKRCIISVDDSCQPTQVGLDQNYWSVKLREEALGL----------------------------------------------------------------------------------------------------------------------------------------
1I8D Chain:A ((1-206))MFTGIVQGTAKLVSIDEKPNFRTHVVE-LPDHMLDGLET-GA--SVAHNGCCL-TVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAARENAM


General information:
TITO was launched using:
RESULT:

Template: 1I8D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 161 -1601 -9.94 -27.14
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain A : 0.56

3D Compatibility (PKB) : -9.94
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.403

(partial model without unconserved sides chains):
PDB file : Tito_1I8D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1I8D-query.scw
PDB file : Tito_Scwrl_1I8D.pdb: