Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--------------PEHCFVRILKYEIPIHGDGYLVGSDVNWWVGNQKVD----------FHINNDCTIQRRGG---TQEKKPYRLDSISTLGEDLPKGFDFILFRESKIDEFLAQGGVTKRILGSMIL--
4F55 Chain:A ((1-128))GGGRTNVPNGYSQNDIQLMANAVYGES--RGEPYLGQVAVAAVILNRVTSASFPNTVSGVIFEPRAFTAVADGQIYLTPNETAKKAVLDAINGWDPTGNALYYFNPDTATSKWIWTRPQIKKI-GKHIFCK


General information:
TITO was launched using:
RESULT:

Template: 4F55.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 418 4128 9.87 41.69
target 2D structure prediction score : 0.35
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : 9.87
2D Compatibility (Sec. Struct. Predict.) : 0.35
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.202

(partial model without unconserved sides chains):
PDB file : Tito_4F55.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4F55-query.scw
PDB file : Tito_Scwrl_4F55.pdb: