Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----------------------------------------------------------------------------------FDCTIER----RLGTQTKARART-----SAKAMPEMI--PAESGKHTVIAGTRVWVYGDCRTYP-THLPDGSTISGRPFQASDVEEDCIELDVHGKP-KQ-
1OCX Chain:A ((1-182))STEKEKMIAGELYRSADETLSRDRLRARQLIHRYNHSLAEEHTLRQQILADLFGQVTEAYIEPTFRCDYGYNIFLGNNFFANFDCVMLDVCPIRIGDNCMLAPGVHIYTATHPIDPVARNSGAELGKPVTI-GNNVWIGGRAVINPGVTIGDNVVVASGAVVTKDVPDNVVVGGNPARIIKKL


General information:
TITO was launched using:
RESULT:

Template: 1OCX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 282 10975 38.92 127.61
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : 38.92
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.341

(partial model without unconserved sides chains):
PDB file : Tito_1OCX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1OCX-query.scw
PDB file : Tito_Scwrl_1OCX.pdb: